Sequence Similarity Clusters for the Entities in PDB 1IFD

Entity #1 | Chains: A
INOVIRUS protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 14307
95 % 12 12 1443
90 % 12 12 1465
70 % 13 13 1478
50 % 13 13 1502
40 % 13 13 1539
30 % 13 13 1568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2MJZ 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i Capsid protein G8P 1977402
2 2HI5 1 A Coat protein B 10864
3 2C0W 1 A COAT PROTEIN B 10864
4 2C0X 1 A COAT PROTEIN B 10864
5 1NH4 1 A Major coat protein 10864
6 1MZT 1 A major coat protein pVIII 10864
7 2CPB 1 A M13 MAJOR COAT PROTEIN 1977402
8 2CPS 1 A M13 MAJOR COAT PROTEIN 1977402
9 1FDM 1 A FD MAJOR COAT PROTEIN IN SDS MICELLES 10864
10 1IFI 1 A INOVIRUS 10864
11 1IFJ 1 A INOVIRUS 10864
12 1IFD 1 A INOVIRUS 10864