Sequence Similarity Clusters for the Entities in PDB 1STP

Entity #1 | Chains: A
STREPTAVIDIN COMPLEX WITH BIOTIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16234
95 % 31 31 1589 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 32 32 1561
70 % 33 33 1541
50 % 33 33 1598
40 % 33 33 1581
30 % 33 33 1558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures