Sequence Similarity Clusters for the Entities in PDB 1STP

Entity #1 | Chains: A
STREPTAVIDIN COMPLEX WITH BIOTIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18099
95 % 32 32 1653 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.7
PDBFlex
90 % 33 33 1627
70 % 33 33 1682
50 % 33 33 1714
40 % 33 33 1759
30 % 33 33 1764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures