Sequence Similarity Clusters for the Entities in PDB 1STP

Entity #1 | Chains: A
STREPTAVIDIN COMPLEX WITH BIOTIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18172
95 % 32 32 1699 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.7
PDBFlex
90 % 33 33 1681
70 % 33 33 1712
50 % 33 33 1743
40 % 33 33 1797
30 % 33 33 1830

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4JO6 1 A, B, C, D Streptavidin UNP residues 25-183 1895
2 1STP 1 A STREPTAVIDIN COMPLEX WITH BIOTIN 1895