Sequence Similarity Clusters for the Entities in PDB 1STP

Entity #1 | Chains: A
STREPTAVIDIN COMPLEX WITH BIOTIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17775
95 % 32 32 1714 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.7
PDBFlex
90 % 33 33 1703
70 % 33 33 1758
50 % 33 33 1802
40 % 33 33 1849
30 % 33 33 1872

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5K68 1 A Streptavidin 1895
2 5VKX 1 A Streptavidin 1895
3 6AUL 1 A Streptavidin 1895
4 6AUE 1 A Streptavidin 1895
5 5IRA 1 A Artificial Metathesase 1895
6 5WBA 1 A Streptavidin UNP residues 38-183 1895
7 5WBD 1 A Streptavidin UNP residues 38-183 1895
8 5WBB 1 A Streptavidin UNP residues 38-183 1895
9 6AUC 1 A Streptavidin 1895
10 6FH8 1 A Streptavidin 1895
11 2BC3 1 A, B Streptavidin 1895
12 5VL5 1 A Streptavidin 1895
13 6ANX 1 A Streptavidin UNP residues 38-183 1895
14 6FRY 1 A Streptavidin mutant K121A 1895
15 5WBC 1 A Streptavidin 1895
16 5F2B 1 A Streptavidin 1895
17 2QCB 1 A Streptavidin 1895
18 6AUH 1 A Streptavidin 1895
19 5K67 1 A Streptavidin 1895
20 5VL8 1 A Streptavidin 1895
21 5L3Y 1 A Streptavidin 1895
22 6AUO 1 A Streptavidin 1895
23 6ESU 1 A Streptavidin 1895
24 4JO6 1 A, B, C, D Streptavidin UNP residues 25-183 1895
25 2WPU 1 A STREPTAVIDIN 1895
26 3PK2 1 A Streptavidin 1895
27 4GJS 1 A, B Streptavidin 1895
28 5CSE 1 A, B Streptavidin UNP residues 37-158 1895
29 6ESS 1 A Streptavidin 1895
30 4GJV 1 A Streptavidin 1895
31 4OKA 1 A Streptavidin UNP residues 38-183 1895
32 1STP 1 A STREPTAVIDIN COMPLEX WITH BIOTIN 1895