Sequence Similarity Clusters for the Entities in PDB 4HHB

Entity #1 | Chains: A,C
HEMOGLOBIN (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 219 43
95 % 24 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 25 257 44
70 % 33 340 22
50 % 71 735 7
40 % 71 735 7
30 % 78 783 10
Entity #2 | Chains: B,D
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 166 78
95 % 23 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 23 261 37
70 % 32 353 17
50 % 72 735 7
40 % 72 735 7
30 % 79 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IRD 1 A Hemoglobin alpha chain 9606
2 2DN2 1 A, C Hemoglobin alpha subunit 9606
3 2DN3 1 A Hemoglobin alpha subunit 9606
4 2DN1 1 A Hemoglobin alpha subunit 9606
5 1J41 1 A, C, E, G Hemoglobin alpha Chain 9606
6 1J40 1 A, C, E, G Hemoglobin alpha Chain 9606
7 3S66 1 A Hemoglobin subunit alpha 9606
8 2D5Z 1 A, C Hemoglobin alpha subunit 9606
9 1BZ0 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
10 1UIW 1 A, C, E, G Hemoglobin alpha chain 9606
11 1J3Y 1 A, C, E, G Hemoglobin alpha Chain 9606
12 6HK2 1 A, C Hemoglobin subunit alpha 9606
13 1THB 1 A, C HEMOGLOBIN A (OXY) (ALPHA CHAIN) 9606
14 5WOG 1 A, B Hemoglobin subunit alpha 9606
15 1J3Z 1 A, C, E, G Hemoglobin alpha Chain 9606
16 1BZ1 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
17 5WOH 1 A, C Hemoglobin subunit alpha 9606
18 4HHB 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
19 1DXV 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
20 1DXT 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
21 1DXU 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
22 6BWP 1 A, C Hemoglobin subunit alpha 9606
23 3DUT 1 A, C Hemoglobin subunit alpha 9606
24 1SDK 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
25 2HHB 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
26 1QSH 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
27 4ROL 1 A, C Hemoglobin subunit alpha 9606
28 1SDL 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
29 1BBB 1 A, C HEMOGLOBIN A (CARBONMONOXY) (ALPHA CHAIN) 9606
30 1QSI 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
31 4MQG 1 A Hemoglobin subunit alpha 9606
32 2D60 1 A, C Hemoglobin alpha subunit 9606
33 2W6V 1 A, C HEMOGLOBIN SUBUNIT ALPHA CHAIN ALPHA, RESIDUES 2-142 9606
34 1GBU 1 A, C HEMOGLOBIN DEOXY 9606
35 1NQP 1 A, C Hemoglobin alpha chain 9606
36 1A01 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
37 1A3N 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
38 5E83 1 A, C Hemoglobin subunit alpha 9606
39 1YE2 1 A, C Hemoglobin alpha chain 9606
40 5KSI 1 A, C Hemoglobin subunit alpha 9606
41 5E6E 1 A Hemoglobin subunit alpha 9606
42 4MQJ 1 A, C, E, G Hemoglobin subunit alpha 9606
43 3HHB 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
44 1K0Y 1 A, C hemoglobin alpha chain 9606
45 1YVQ 1 A, C Hemoglobin alpha chain 9606
46 5UCU 1 A Hemoglobin subunit alpha 9606
47 3NL7 1 A Hemoglobin subunit alpha 9606
48 1SHR 1 A, C Hemoglobin alpha chain 9606
49 1Y4V 1 A, C Hemoglobin alpha chain 9606
50 5URC 1 A, C Hemoglobin subunit alpha 9606
51 1G9V 1 A, C HEMOGLOBIN ALPHA CHAIN 9606
52 1YVT 1 A Hemoglobin alpha chain 9606
53 1CLS 1 A, C HEMOGLOBIN CROSS-LINKED DEOXY FORM 9606
54 1QXE 1 A, C Hemoglobin alpha chain alpha chain 9606
55 1RQ3 1 A, C Hemoglobin alpha chain 9606
56 1XZ2 1 A, C Hemoglobin alpha chain 9606
57 3QJE 1 A, C Hemoglobin subunit alpha 9606
58 4L7Y 1 A, C Hemoglobin subunit alpha 9606
59 3D7O 1 A Hemoglobin subunit alpha 9606
60 3IC0 1 A, C Hemoglobin subunit alpha 9606
61 1BUW 1 A, C PROTEIN (HEMOGLOBIN) THE SULFHYDRYL GROUPS OF CYSTEINE 93 OF BETA SUBUNITS ARE S-NITROSYLATED. THE HEME GROUPS ARE NITROSYLATED. 9606
62 1XXT 1 A, C Hemoglobin alpha chain 9606
63 1HBB 1 A, C HEMOGLOBIN A (DEOXY) (ALPHA CHAIN) 9606
64 1KD2 1 A, C Hemoglobin alpha chain 9606
65 5E29 1 A, C Hemoglobin subunit alpha 9606
66 3WHM 1 A, E Hemoglobin subunit alpha 9606
67 1A0Z 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
68 6DI4 1 A, C Hemoglobin subunit alpha 9606
69 1Y83 1 A, C Hemoglobin alpha chain 9606
70 1A00 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
71 1Y7Z 1 A, C Hemoglobin alpha chain 9606
72 4N8T 1 A Hemoglobin subunit alpha 9606
73 2HBS 1 A, C, E, G HEMOGLOBIN S (DEOXY), ALPHA CHAIN 9606
74 1Y7D 1 A, C Hemoglobin alpha chain 9606
75 1Y4G 1 A, C Hemoglobin alpha chain 9606
76 4MQI 1 A Hemoglobin subunit alpha 9606
77 1Y45 1 A, C Hemoglobin alpha chain 9606
78 4NI1 1 A Hemoglobin subunit alpha 9606
79 2HHD 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
80 1YIH 1 A, C Hemoglobin alpha chain 9606
81 1K1K 1 A HEMOGLOBIN ALPHA CHAIN 9606
82 3OO4 1 A Hemoglobin subunit alpha 9606
83 1GBV 1 A, C HEMOGLOBIN ALPHA-OXY, BETA-DEOXY, T STATE 9606
84 2HBE 1 A HEMOGLOBIN A (N-BUTYL ISOCYANIDE) (ALPHA CHAIN) 9606
85 1Y4F 1 A, C Hemoglobin alpha chain 9606
86 4ROM 1 A, C Hemoglobin subunit alpha 9606
87 1Y5J 1 A, C Hemoglobin alpha chain 9606
88 1Y4P 1 A, C Hemoglobin alpha chain 9606
89 1Y2Z 1 A, C Hemoglobin alpha chain 9606
90 6BNR 1 A, C Hemoglobin subunit alpha 9606
91 4X0L 1 A Hemoglobin subunit alpha 9606
92 1HDB 1 A, C HEMOGLOBIN (DEOXY) BETA-V67T ALPHA-BETA-ALPHA-BETA TETRAMER 9606
93 1YHE 1 A, C Hemoglobin alpha chain 9606
94 5U3I 1 A, C Hemoglobin subunit alpha 9606
95 3S65 1 A, C Hemoglobin subunit alpha 9606
96 6HBW 1 A, C PROTEIN (HEMOGLOBIN ALPHA 1) 9606
97 1Y31 1 A, C Hemoglobin alpha chain 9606
98 1Y0D 1 A, C Hemoglobin alpha chain Residues 1-140 9606
99 3QJC 1 A Hemoglobin subunit alpha 9606
100 1Y85 1 A, C Hemoglobin alpha chain 9606
101 1HBA 1 A, C HEMOGLOBIN ROTHSCHILD (DEOXY) (ALPHA CHAIN) 9606
102 2HBC 1 A HEMOGLOBIN A (ETHYL ISOCYANIDE) (ALPHA CHAIN) 9606
103 1Y0W 1 A, C Hemoglobin alpha chain 9606
104 6BWU 1 A Hemoglobin subunit alpha 9606
105 1Y0T 1 A, C Hemoglobin alpha chain 9606
106 1Y4Q 1 A, C Hemoglobin alpha chain 9606
107 1Y35 1 A, C Hemoglobin alpha chain 9606
108 1Y5F 1 A, C Hemoglobin alpha chain 9606
109 3WCP 1 A, C Hemoglobin subunit alpha 9606
110 1A0U 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
111 1RPS 1 A, C Hemoglobin alpha chain 9606
112 1Y7G 1 A, C Hemoglobin alpha chain 9606
113 1Y5K 1 A, C Hemoglobin alpha chain 9606
114 1Y22 1 A, C Hemoglobin alpha chain 9606
115 1RQA 1 A, C Hemoglobin alpha chain 9606
116 1Y4R 1 A, C Hemoglobin alpha chain 9606
117 1GZX 1 A, C HEMOGLOBIN ALPHA CHAIN LIGANDED T STATE 9606
118 1Y4B 1 A, C Hemoglobin alpha chain 9606
119 2HHE 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
120 2HBD 1 A HEMOGLOBIN A (METHYL ISOCYANIDE) (ALPHA CHAIN) 9606
121 3P5Q 1 A Hemoglobin subunit alpha 9606
122 1DKE 1 A, C HEMOGLOBIN: ALPHA CHAIN 9606
123 1HGA 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
124 1HGC 1 A, C HEMOGLOBIN (OXY) (ALPHA CHAIN) 9606
125 2HBF 1 A HEMOGLOBIN A (N-PROPYL ISOCYANIDE) (ALPHA CHAIN) 9606
126 1YEV 1 A, C Hemoglobin alpha chain 9606
127 1YZI 1 A Hemoglobin alpha chain 9606
128 3HXN 1 A, C Hemoglobin subunit alpha 9606
129 5UFJ 1 A, C Hemoglobin subunit alpha 9606
130 1RQ4 1 A, C Hemoglobin alpha chain 9606
131 6HAL 1 A, C Hemoglobin subunit alpha 9606
132 2YRS 1 A, C, I, M Hemoglobin subunit alpha 9606
133 5KDQ 1 A, C Hemoglobin subunit alpha 9606
134 1Y7C 1 A, C Hemoglobin alpha chain 9606
135 4MQK 1 A, C, E, G Hemoglobin subunit alpha 9606
136 4M4B 1 A Hemoglobin subunit alpha 9606
137 1HGB 1 A, C HEMOGLOBIN (AQUO MET) (ALPHA CHAIN) 9606
138 1YEO 1 A, C Hemoglobin alpha chain 9606
139 1YEU 1 A, C Hemoglobin alpha chain 9606
140 4M4A 1 A Hemoglobin subunit alpha 9606
141 1YH9 1 A, C Hemoglobin alpha chain 9606
142 1MKO 1 A, C Hemoglobin alpha chain 9606
143 1Y46 1 A, C Hemoglobin alpha chain 9606
144 1LJW 1 A hemoglobin alpha chain 9606
145 3ONZ 1 A Hemoglobin subunit alpha Hemoglobin Chain A 9606
146 1HHO 1 A HEMOGLOBIN A (OXY) (ALPHA CHAIN) 9606
147 1M9P 1 A, C Hemoglobin alpha chain 9606
148 1BIJ 1 A, C HEMOGLOBIN A LYS B82/D82 CROSSLINKED HEMOGLOBIN 9606
149 1HAB 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
150 3R5I 1 A, C Hemoglobin subunit alpha 9606
151 3OO5 1 A Hemoglobin subunit alpha 9606
152 1NEJ 1 A, C Hemoglobin alpha chain alpha chain 9606
153 4NI0 1 A Hemoglobin subunit alpha 9606
154 1SI4 1 A, C Hemoglobin alpha chain 9606
155 1YIE 1 A, C Hemoglobin alpha chain 9606
156 1B86 1 A, C PROTEIN (HEMOGLOBIN; ALPHA CHAIN) 9606
157 5EE4 2 C, E Hemoglobin subunit alpha 9606
158 1HAC 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
159 6BB5 1 A Hemoglobin subunit alpha 9606
160 5HY8 1 A, C, E, G, S Hemoglobin subunit alpha 9606
161 1QXD 1 A, C Hemoglobin alpha chain alpha chain 9606
162 4FC3 1 A Hemoglobin subunit alpha 9606
163 1YE0 1 A, C Hemoglobin alpha chain 9606
164 3IC2 1 A, C Hemoglobin subunit alpha 9606
165 1YHR 1 A, C Hemoglobin alpha chain 9606
166 5KSJ 1 A, C Hemoglobin subunit alpha 9606
167 1Z8U 2 B, D Hemoglobin alpha chain 9606
168 1YFF 1 A, C, E, G Hemoglobin alpha chain 9606
169 1LFQ 1 A Hemoglobin alpha chain 9606
170 1LFT 1 A Hemoglobin alpha chain 9606
171 3B75 1 A, C, E, G, S Hemoglobin subunit alpha 9606
172 1YGF 1 A, C Hemoglobin alpha chain 9606
173 1YG5 1 A, C Hemoglobin alpha chain 9606
174 1LFL 1 A, C, P, R Hemoglobin alpha chain 9606
175 1YEN 1 A, C Hemoglobin alpha chain 9606
176 5X2S 1 A, C, E, G, I, K Hemoglobin subunit alpha 9606
177 1NIH 1 A, C HEMOGLOBIN (NICKELOUS DEOXY) (ALPHA CHAIN) 9606
178 1YGD 1 A, C Hemoglobin alpha chain 9606
179 5X2U 1 A, C, E, G, I, K Hemoglobin subunit alpha 9606
180 1A9W 1 A, C HEMOGLOBIN (ALPHA CHAIN) HUMAN GOWER II EMBRYONIC HEMOGLOBIN 9606
181 1YEQ 1 A, C Hemoglobin alpha chain 9606
182 1FN3 1 A, C HEMOGLOBIN ALPHA CHAIN 9606
183 5HU6 1 A Hemoglobin subunit alpha 9606
184 1LFV 1 A Hemoglobin alpha chain 9606
185 5X2T 1 A, C, E, G, I, K Hemoglobin subunit alpha 9606
186 4N7O 1 A, C, E, G, I, K Hemoglobin subunit alpha UNP residues 2-142 9606
187 4XS0 1 A Hemoglobin subunit alpha 9606
188 1LFZ 1 A Hemoglobin alpha chain 9606
189 4N7N 1 A, C, E, G, I, K Hemoglobin subunit alpha UNP residues 2-142 9606
190 1JY7 1 A, C, P, R, U, W Hemoglobin alpha chain 9606
191 5JDO 3 C Hemoglobin subunit alpha 9606
192 5JDO 5 E Hemoglobin subunit alpha 9606
193 5X2R 1 A, C, E, G, I, K Hemoglobin subunit alpha 9606
194 3D17 1 A, C Hemoglobin subunit alpha 9606
195 3OVU 3 C Hemoglobin subunit alpha 9606
196 4N7P 1 A, C, E, G, I, K Hemoglobin subunit alpha UNP residues 2-142 9606
197 1LFY 1 A Hemoglobin alpha chain 9606
198 3S48 2 C, D Hemoglobin subunit alpha 9606
199 3SZK 1 A, D Hemoglobin subunit alpha 9606
200 1Y01 2 B Hemoglobin alpha chain 9606
201 3IA3 2 B, D Hemoglobin subunit alpha 9606
202 1HBS 1 A, C, E, G HEMOGLOBIN S (DEOXY) (ALPHA CHAIN) 9606
203 4WJG 1 A, F, K, P, U, Z Hemoglobin subunit alpha 9606
204 1CMY 1 A, C HEMOGLOBIN YPSILANTI (CARBONMONOXY) (ALPHA CHAIN) 9606
205 3ODQ 1 A, C Hemoglobin subunit alpha 9606
206 5VMM 1 A, C Hemoglobin subunit alpha 9606
207 4IJ2 1 A, C Hemoglobin subunit alpha 9606
208 1YE1 1 A, C Hemoglobin alpha chain 9606
209 6NBC 1 A, C Hemoglobin subunit alpha 9606
210 6NBD 1 A, C Hemoglobin subunit alpha 9606
211 5NI1 1 A, C Hemoglobin subunit alpha 9606
212 2M6Z 1 A, C Hemoglobin subunit alpha 9606
213 3KMF 1 A, E Hemoglobin subunit alpha 9606
214 2DXM 1 A, C Hemoglobin subunit alpha 9606
215 2H35 1 A, C Hemoglobin alpha subunit 9606
216 1COH 1 A, C HEMOGLOBIN (FERROUS CARBONMONOXY) (ALPHA CHAIN) 9606
217 1HCO 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 9606
218 2HCO 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 9606
219 1FDH 1 A, B HEMOGLOBIN F (DEOXY) (ALPHA CHAIN) 9606