Sequence Similarity Clusters for the Entities in PDB 4HHB

Entity #1 | Chains: A,C
HEMOGLOBIN (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 218 41
95 % 23 255 38 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 24 256 41
70 % 32 339 22
50 % 69 734 7
40 % 69 734 7
30 % 76 779 10
Entity #2 | Chains: B,D
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 165 79
95 % 22 256 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 22 260 37
70 % 31 352 17
50 % 70 734 7
40 % 70 734 7
30 % 77 779 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IRD 2 B Hemoglobin beta chain 9606
2 2DN2 2 B, D Hemoglobin beta subunit 9606
3 2DN3 2 B Hemoglobin beta subunit 9606
4 2DN1 2 B Hemoglobin beta subunit 9606
5 1J41 2 B, D, F, H Hemoglobin beta Chain 9606
6 1J40 2 B, D, F, H Hemoglobin beta Chain 9606
7 1BAB 2 B, D HEMOGLOBIN THIONVILLE (DEOXY) (BETA CHAIN) 9606
8 2D5Z 2 B, D Hemoglobin beta subunit 9606
9 1BZ0 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
10 1UIW 2 B, D, F, H Hemoglobin beta chain 9606
11 1J3Y 2 B, D, F, H Hemoglobin beta Chain 9606
12 3QJD 2 B, D Hemoglobin subunit beta 9606
13 1THB 2 B, D HEMOGLOBIN A (DEOXY) (BETA CHAIN) 9606
14 1BZZ 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
15 5WOG 2 C, D Hemoglobin subunit beta 9606
16 1J3Z 2 B, D, F, H Hemoglobin beta Chain 9606
17 1BZ1 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
18 3NMM 2 B, D Hemoglobin subunit beta 9606
19 5WOH 2 B, D Hemoglobin subunit beta 9606
20 4HHB 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
21 1DXV 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
22 1DXT 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
23 6BWP 2 B, D Hemoglobin subunit beta 9606
24 1SDK 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
25 2HHB 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
26 1QSH 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
27 4ROL 2 B, D Hemoglobin subunit beta 9606
28 1SDL 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
29 1BBB 2 B, D HEMOGLOBIN A (CARBONMONOXY) (BETA CHAIN) 9606
30 1QSI 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
31 1CBM 1 A, B, C, D HEMOGLOBIN BETA 4 (CARBONMONOXY) 9606
32 2D60 2 B, D Hemoglobin beta subunit 9606
33 2W6V 2 B, D HEMOGLOBIN SUBUNIT BETA CHAIN BETA, RESIDUES 2-147 9606
34 1A3N 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
35 3QJB 2 B Hemoglobin subunit beta 9606
36 1A3O 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
37 5KSI 2 B, D Hemoglobin subunit beta 9606
38 3HHB 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
39 1R1Y 2 B, D Hemoglobin beta chain 9606
40 1K0Y 2 B, D hemoglobin beta chain 9606
41 5UCU 2 B Hemoglobin subunit beta 9606
42 1CBL 1 A, B, C, D HEMOGLOBIN BETA 4 (DEOXY) 9606
43 5URC 2 B, D Hemoglobin subunit beta 9606
44 1G9V 2 B, D HEMOGLOBIN BETA CHAIN 9606
45 1CLS 2 B, D HEMOGLOBIN CROSS-LINKED DEOXY FORM 9606
46 1VWT 2 B, D HEMOGLOBIN ALPHA AQUOMET, BETA DEOXY 9606
47 1QXE 2 B, D Hemoglobin beta chain beta chain 9606
48 1RQ3 2 B, D Hemoglobin beta chain 9606
49 1XZ2 2 B, D Hemoglobin beta chain 9606
50 4L7Y 2 B, D Hemoglobin subunit beta 9606
51 1XZ7 2 B, D Hemoglobin beta chain 9606
52 3D7O 2 B Hemoglobin subunit beta 9606
53 3IC0 2 B, D Hemoglobin subunit beta 9606
54 1BUW 2 B, D PROTEIN (HEMOGLOBIN) THE SULFHYDRYL GROUPS OF CYSTEINE 93 OF BETA SUBUNITS ARE S-NITROSYLATED. THE HEME GROUPS ARE NITROSYLATED. 9606
55 1XXT 2 B, D Hemoglobin beta chain 9606
56 1HBB 2 B, D HEMOGLOBIN A (DEOXY) (BETA CHAIN) 9606
57 1KD2 2 B, D Hemoglobin beta chain 9606
58 5E29 2 B, D Hemoglobin subunit beta 9606
59 3WHM 2 B, F Hemoglobin subunit beta 9606
60 6DI4 2 B, D Hemoglobin subunit beta 9606
61 4N8T 2 B Hemoglobin subunit beta 9606
62 4NI1 2 B Hemoglobin subunit beta 9606
63 2HHD 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
64 3OO4 2 B Hemoglobin subunit beta 9606
65 2HBE 2 B HEMOGLOBIN A (N-BUTYL ISOCYANIDE) (BETA CHAIN) 9606
66 1XY0 2 B, D Hemoglobin beta chain 9606
67 4ROM 2 B, D Hemoglobin subunit beta 9606
68 1XZ4 2 B, D Hemoglobin beta chain 9606
69 6BNR 2 B, D Hemoglobin subunit beta 9606
70 4X0L 2 B Hemoglobin subunit beta 9606
71 1YHE 2 B, D Hemoglobin beta chain 9606
72 1XZV 2 B, D Hemoglobin beta chain 9606
73 1Y0D 2 B, D Hemoglobin beta chain 9606
74 1Y85 2 B, D Hemoglobin beta chain RESIDUES 1-145 9606
75 1AJ9 2 B HEMOGLOBIN (BETA CHAIN) 9606
76 2HBC 2 B HEMOGLOBIN A (ETHYL ISOCYANIDE) (BETA CHAIN) 9606
77 6BWU 2 B Hemoglobin subunit beta 9606
78 1XZ5 2 B, D Hemoglobin beta chain 9606
79 3WCP 2 B, D Hemoglobin subunit beta 9606
80 1RPS 2 B, D Hemoglobin beta chain 9606
81 1XZU 2 B, D Hemoglobin beta chain 9606
82 1Y09 2 B, D Hemoglobin beta chain 9606
83 1GZX 2 B, D HEMOGLOBIN BETA CHAIN LIGANDED T STATE 9606
84 2HHE 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
85 2HBD 2 B HEMOGLOBIN A (METHYL ISOCYANIDE) (BETA CHAIN) 9606
86 3P5Q 2 B Hemoglobin subunit beta 9606
87 1DKE 2 B, D HEMOGLOBIN: BETA CHAIN BETA HEME CONTAINS NI+2 ION 9606
88 1HGA 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
89 1HGC 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
90 2HBF 2 B HEMOGLOBIN A (N-PROPYL ISOCYANIDE) (BETA CHAIN) 9606
91 1Y0A 2 B, D Hemoglobin beta chain 9606
92 1YZI 2 B Hemoglobin beta chain 9606
93 3HXN 2 B, D Hemoglobin subunit beta 9606
94 1XYE 2 B, D Hemoglobin beta chain 9606
95 1RQ4 2 B, D Hemoglobin beta chain 9606
96 6HAL 2 B, D Hemoglobin subunit beta 9606
97 5KDQ 2 B, D Hemoglobin subunit beta 9606
98 4M4B 2 B Hemoglobin subunit beta 9606
99 6FQF 1 A, B, C, D Hemoglobin subunit beta 9606
100 1HGB 2 B, D HEMOGLOBIN (AQUO MET) (BETA CHAIN) 9606
101 1Y0C 2 B, D Hemoglobin beta chain 9606
102 4M4A 2 B Hemoglobin subunit beta 9606
103 1YH9 2 B, D Hemoglobin beta chain 9606
104 1MKO 2 B, D Hemoglobin beta chain 9606
105 1LJW 2 B hemoglobin beta chain 9606
106 3ONZ 2 B Hemoglobin subunit beta Hemoglobin Chain B 9606
107 1HHO 2 B HEMOGLOBIN A (OXY) (BETA CHAIN) 9606
108 1BIJ 2 B, D HEMOGLOBIN A LYS B82/D82 CROSSLINKED HEMOGLOBIN 9606
109 1HAB 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
110 1R1X 2 B Hemoglobin beta chain 9606
111 3R5I 2 B, D Hemoglobin subunit beta 9606
112 3OO5 2 B Hemoglobin subunit beta 9606
113 4MQC 2 B Hemoglobin subunit beta 9606
114 4NI0 2 B Hemoglobin subunit beta 9606
115 1RVW 2 B HEMOGLOBIN CARBONMONXY HEMES 9606
116 1B86 2 B, D PROTEIN (HEMOGLOBIN; BETA CHAIN) 2,3-DIPHOSPHOGLYCERATE COMPLEX 9606
117 5EE4 3 D, F Hemoglobin subunit beta 9606
118 1HAC 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
119 6BB5 2 B Hemoglobin subunit beta 9606
120 5HY8 2 B, D, F, H, T Hemoglobin subunit beta 9606
121 1QXD 2 B, D Hemoglobin beta chain beta chain 9606
122 4FC3 2 B Hemoglobin subunit beta 9606
123 3IC2 2 B, D Hemoglobin subunit beta 9606
124 4MQH 2 B Hemoglobin subunit beta 9606
125 1YHR 2 B, D Hemoglobin beta chain 9606
126 5KSJ 2 B, D Hemoglobin subunit beta 9606
127 1LFQ 2 B Hemoglobin beta chain 9606
128 1LFT 2 B Hemoglobin beta chain 9606
129 3B75 2 B, D, F, H, T Hemoglobin subunit beta 9606
130 1LFL 2 B, D, Q, S Hemoglobin beta chain 9606
131 1YDZ 2 B, D Hemoglobin beta chain 9606
132 5X2S 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
133 1NIH 2 B, D HEMOGLOBIN (FERROUS CARBONMONOXY) (BETA CHAIN) 9606
134 5X2U 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
135 1FN3 2 B, D HEMOGLOBIN BETA CHAIN 9606
136 1Y8W 2 B, D Hemoglobin beta chain 9606
137 5HU6 2 B Hemoglobin subunit beta 9606
138 1LFV 2 B Hemoglobin beta chain 9606
139 5X2T 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
140 4N7O 2 B, D, F, H, J, L Hemoglobin subunit beta UNP residues 2-147 9606
141 4XS0 2 B Hemoglobin subunit beta 9606
142 1LFZ 2 B Hemoglobin beta chain 9606
143 4N7N 2 B, D, F, H, J, L Hemoglobin subunit beta UNP residues 2-147 9606
144 1JY7 2 B, D, Q, S, V, X Hemoglobin beta chain 9606
145 5JDO 4 D Hemoglobin subunit beta 9606
146 5JDO 6 F Hemoglobin subunit beta 9606
147 5X2R 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
148 3D17 2 B, D Hemoglobin subunit beta 9606
149 4N7P 2 B, D, F, H, J, L Hemoglobin subunit beta UNP residues 2-147 9606
150 1LFY 2 B Hemoglobin beta chain 9606
151 3SZK 2 B, E Hemoglobin subunit beta 9606
152 4WJG 2 1, B, G, L, Q, V Hemoglobin subunit beta 9606
153 3ODQ 2 B, D Hemoglobin subunit beta 9606
154 5VMM 2 B, D Hemoglobin subunit beta 9606
155 4IJ2 2 B, D Hemoglobin subunit beta 9606
156 6NBC 2 B, D Hemoglobin subunit beta 9606
157 6NBD 2 B, D Hemoglobin subunit beta 9606
158 5NI1 2 B, D Hemoglobin subunit beta 9606
159 2M6Z 2 B, D Hemoglobin subunit beta 9606
160 3KMF 2 C, G Hemoglobin subunit beta 9606
161 2DXM 2 B, D Hemoglobin subunit beta 9606
162 2H35 2 B, D Hemoglobin beta subunit 9606
163 1COH 2 B, D HEMOGLOBIN (COBALTOUS DEOXY) (BETA CHAIN) 9606
164 1HCO 2 B HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN) 9606
165 2HCO 2 B HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN) 9606