Sequence Similarity Clusters for the Entities in PDB 6H6H

Entity #1 | Chains: A,D
H-2D cell surface glycoprotein protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56959
95 % 7 8 3167
90 % 7 8 3258
70 % 10 13 2359
50 % 12 17 2005
40 % 12 17 2051
30 % 12 17 2077
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 78 143 110
95 % 135 271 68
90 % 135 271 75
70 % 645 1064 4
50 % 659 1088 4
40 % 659 1088 4
30 % 659 1088 7
Entity #3 | Chains: C,F
SER-GLY-PRO-SER-ASN-THR-PRO-PRO-GLU-ILE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures