Sequence Similarity Clusters for the Entities in PDB 6IWG

Entity #1 | Chains: A
MHC class I antigen protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43637
95 % 1 2 38709 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 36928
70 % 179 836 6
50 % 180 850 7
40 % 188 907 8
30 % 188 932 13
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 3424
95 % 1 11 4136 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 196 811 4
70 % 218 1115 4
50 % 222 1139 3
40 % 222 1139 4
30 % 222 1139 9
Entity #3 | Chains: C
N-myristoylated 4-mer lipopeptide protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures