Sequence Similarity Clusters for the Entities in PDB 6IWH

Entity #1 | Chains: A
MHC class I antigen protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 48708
95 % 2 2 37501 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 35773
70 % 244 822 6
50 % 244 827 8
40 % 252 871 9
30 % 252 895 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 3323
95 % 3 11 4050 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 260 773 3
70 % 294 1076 4
50 % 299 1100 4
40 % 299 1100 4
30 % 299 1100 7
Entity #3 | Chains: C
C14-GGGI lipopeptide protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures