Sequence Similarity Clusters for the Entities in PDB 6IWH

Entity #1 | Chains: A
MHC class I antigen protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42960
95 % 2 2 38075 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 36347
70 % 249 824 6
50 % 250 838 8
40 % 258 883 9
30 % 258 907 13
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 3450
95 % 3 11 4064 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 266 784 4
70 % 300 1087 4
50 % 305 1111 4
40 % 305 1111 5
30 % 305 1111 9
Entity #3 | Chains: C
C14-GGGI lipopeptide protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures