Sequence Similarity Clusters for the Entities in PDB 6JXK

Entity #1 | Chains: A,E
Potassium-transporting ATPase alpha chain 1 protein, length: 987 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28914
95 % 6 12 6220 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.0
PDBFlex
90 % 6 12 6249
70 % 6 12 6185
50 % 36 44 1296
40 % 36 44 1350
30 % 36 44 1379
Entity #2 | Chains: B,F
Potassium-transporting ATPase subunit beta protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 5441
95 % 6 12 6428 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 6 12 6313
70 % 6 12 6249
50 % 6 12 5974
40 % 6 12 5930
30 % 35 43 1420

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures