Sequence Similarity Clusters for the Entities in PDB 6K6B

Entity #1 | Chains: A
3LRH intrabody protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 12831
95 % 5 6 9812 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 5 6 9733
70 % 5 6 9448
50 % 5 6 8793
40 % 5 6 8424
30 % 5 6 7855
Entity #2 | Chains: B
Protein A protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 82345
95 % 1 1 54510
90 % 1 1 51471
70 % 4 5 8506
50 % 4 5 7696
40 % 4 5 7427
30 % 4 5 7347

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures