Sequence Similarity Clusters for the Entities in PDB 6PZ8

Entity #1 | Chains: A,E,I
S protein protein, length: 472 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31334
95 % 1 1 26236
90 % 1 1 25368
70 % 1 1 23647
50 % 1 1 20771
40 % 1 1 19015
30 % 1 1 16699
Entity #2 | Chains: B,F,J
S protein protein, length: 726 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30853
95 % 1 1 26235
90 % 1 1 25986
70 % 1 1 23110
50 % 1 1 20770
40 % 1 1 18604
30 % 1 1 16698
Entity #3 | Chains: C,D,H
G2 heavy chain protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 9465
95 % 3 3 9885
90 % 3 3 9716
70 % 2878 3036 1
50 % 5987 6341 1
40 % 5987 6341 1
30 % 6027 6387 1
Entity #4 | Chains: G,K,L
G2 light chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 8797
95 % 11 20 1438
90 % 102 120 159
70 % 2317 2454 2
50 % 5988 6341 1
40 % 5988 6341 1
30 % 6028 6387 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures