Sequence Similarity Clusters for the Entities in PDB 6PZ8

Entity #1 | Chains: A,E,I
S protein protein, length: 472 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30108
95 % 1 1 27072
90 % 1 1 25422
70 % 1 1 23154
50 % 1 1 20372
40 % 1 1 18233
30 % 1 1 16711
Entity #2 | Chains: B,F,J
S protein protein, length: 726 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30107
95 % 1 1 25613
90 % 1 1 24782
70 % 1 1 22596
50 % 1 1 19918
40 % 1 1 18232
30 % 1 1 16354
Entity #3 | Chains: C,D,H
G2 heavy chain protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 9253
95 % 3 3 9602
90 % 3 3 9513
70 % 2779 2928 1
50 % 2909 3079 1
40 % 2909 3079 1
30 % 5812 6153 1
Entity #4 | Chains: G,K,L
G2 light chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 9252
95 % 11 20 1411
90 % 102 120 153
70 % 2258 2391 2
50 % 2866 3030 2
40 % 2866 3030 2
30 % 5813 6153 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures