Sequence Similarity Clusters for the Entities in PDB 6S9T

Entity #1 | Chains: A
LIM domain-binding protein 1 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68424
95 % 1 2 38811 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 2 37061
70 % 1 2 32912
50 % 1 2 28621
40 % 1 2 26020
30 % 1 2 23140
Entity #2 | Chains: D
Darpin 3 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 81749
95 % 1 1 54971
90 % 1 1 51915
70 % 1 1 45274
50 % 56 117 229
40 % 67 129 214
30 % 71 140 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures