Sequence Similarity Clusters for the Entities in PDB 6S9T

Entity #1 | Chains: A
LIM domain-binding protein 1 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 80189
95 % 1 2 36222 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 2 34612
70 % 1 2 30905
50 % 1 2 26939
40 % 1 2 24532
30 % 1 2 21824
Entity #2 | Chains: D
Darpin 3 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 84970
95 % 1 1 48187
90 % 1 1 44309
70 % 1 1 44519
50 % 54 114 226
40 % 55 115 231
30 % 58 125 228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures