CENPA - centromere protein A

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 20 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P49450 HGNC Approved Gene Symbol: CENPA 
Ensembl ENSG00000115163 
Synonyms : CENP-A, CenH3 Previous Names: "centromere protein A (17kD)", "centromere protein A, 17kDa"
HgncId : HGNC:1851  Omim: 117139 
Refseq: NM_001809  GenBank: U14518 
 
Genomic coordinates: Cytogenetic location: 2p23.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CENPA Gene Structure

Chromosome: chr2
Genbank ID: NM_001809 Orientation: +
Length coding sequence : 420 nucleotides.
Regionstartendregion lengthphase at end
UTR27,008,88127,009,064
Exon27,009,06527,009,1641001
Exon27,014,99927,015,1081100
Exon27,015,62427,015,701780
Exon27,016,01327,016,1471350
UTR27,016,14827,016,194