NPM1 - nucleophosmin 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for NPM1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P06748 HGNC Approved Gene Symbol: NPM1 
Ensembl ENSG00000181163 
Synonyms : B23, NPM Previous Names: "nucleophosmin (nucleolar phosphoprotein B23, numatrin)", "nucleophosmin"
HgncId : HGNC:7910  Omim: 164040 
Refseq: NM_002520  GenBank: M26697 
 
Genomic coordinates: Cytogenetic location: 5q35.1 reset view
Currently highlighted: Genomic position: chr5:170,814,953 View in genomic position mapping tool
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

NPM1 Gene Structure

Chromosome: chr5
Genbank ID: NM_002520 Orientation: +
Length coding sequence : 882 nucleotides.
Regionstartendregion lengthphase at end
UTR170,814,707170,814,952
Exon170,814,953170,815,010581
Exon170,817,055170,817,134800
Exon170,818,309170,818,4281200
Exon170,818,710170,818,803941
Exon170,819,714170,819,8201070
Exon170,819,918170,819,982652
Exon170,827,157170,827,214580
Exon170,827,843170,827,929870
Exon170,832,306170,832,4071020
Exon170,834,704170,834,778750
Exon170,837,531170,837,569390
UTR170,837,570170,837,888