NPM1 - nucleophosmin 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for NPM1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P06748 HGNC Approved Gene Symbol: NPM1 
Ensembl ENSG00000181163 
Synonyms : B23, NPM Previous Names: "nucleophosmin (nucleolar phosphoprotein B23, numatrin)", "nucleophosmin"
HgncId : HGNC:7910  Omim: 164040 
Refseq: NM_002520  GenBank: M26697 
 
Genomic coordinates: Cytogenetic location: 5q35.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

NPM1 Gene Structure

Chromosome: chr5
Genbank ID: NM_002520 Orientation: +
Length coding sequence : 882 nucleotides.
Regionstartendregion lengthphase at end
UTR171,387,703171,387,948
Exon171,387,949171,388,006581
Exon171,390,051171,390,130800
Exon171,391,305171,391,4241200
Exon171,391,706171,391,799941
Exon171,392,710171,392,8161070
Exon171,392,914171,392,978652
Exon171,400,153171,400,210580
Exon171,400,839171,400,925870
Exon171,405,302171,405,4031020
Exon171,407,700171,407,774750
Exon171,410,527171,410,565390
UTR171,410,566171,410,884