PRKDC - protein kinase, DNA-activated, catalytic polypeptide

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PRKDC View list of all current human gene IDs
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Cross References
UniProt: P78527 HGNC Approved Gene Symbol: PRKDC 
Previous Symbols: HYRC, HYRC1 Ensembl ENSG00000253729 
Synonyms : DNPK1, p350, DNAPK, XRCC7, DNA-PKcs
HgncId : HGNC:9413  Omim: 600899 
Refseq: NM_001081640 
 
Genomic coordinates: Cytogenetic location: 8q11.21 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PRKDC Gene Structure

Chromosome: chr8
Genbank ID: NM_001081640 Orientation: -
Length coding sequence : 12290 nucleotides.
Regionstartendregion lengthphase at end
UTR
48,872,68748,872,743
Exon48,872,53348,872,6861541
Exon48,869,91548,869,991770
Exon48,869,73148,869,823930
Exon48,868,43448,868,508750
Exon48,866,89848,867,0061091
Exon48,866,36748,866,4791130
Exon48,866,18048,866,2791001
Exon48,856,53448,856,589560
Exon48,856,41348,856,443311
Exon48,855,76948,855,9261580
Exon48,852,11148,852,2571470
Exon48,848,91348,849,0771650
Exon48,848,29248,848,4601691
Exon48,847,56948,847,618500
Exon48,846,52548,846,6501260
Exon48,845,58048,845,7321530
Exon48,843,23248,843,3471162
Exon48,842,41348,842,5721600
Exon48,841,65248,841,738870
Exon48,840,33148,840,4501200
Exon48,839,75448,839,9131601
Exon48,830,83748,830,9431070
Exon48,827,88848,827,978911
Exon48,826,46148,826,6241640
Exon48,824,97048,825,1221530
Exon48,817,42948,817,5361080
Exon48,815,12948,815,3552272
Exon48,812,93348,813,027951
Exon48,811,03048,811,1291002
Exon48,809,72148,809,8541341
Exon48,805,70048,805,9472480
Exon48,802,81848,803,0412242
Exon48,801,57548,801,7832091
Exon48,801,07948,801,2111332
Exon48,800,10848,800,2661592
Exon48,798,50548,798,7082042
Exon48,794,47348,794,6581862
Exon48,793,97748,794,0811052
Exon48,792,05248,792,2191682
Exon48,790,28548,790,4121281
Exon48,777,11748,777,3242082
Exon48,775,96048,776,1381791
Exon48,774,93448,775,1021692
Exon48,774,62348,774,688662
Exon48,773,46048,773,532730
Exon48,772,17248,772,3201492
Exon48,771,41048,771,5471382
Exon48,771,07748,771,1961202
Exon48,769,71748,769,8601442
Exon48,767,78348,767,9341521
Exon48,766,64448,766,7751321
Exon48,765,23448,765,3451122
Exon48,761,94048,762,0641251
Exon48,761,71548,761,8641501
Exon48,752,57748,752,7501741
Exon48,751,70948,751,807991
Exon48,749,77348,749,9802082
Exon48,748,89948,749,0881900
Exon48,746,75748,746,9572010
Exon48,744,37548,744,4871132
Exon48,743,16648,743,2971322
Exon48,740,72948,740,9081802
Exon48,739,21748,739,4222061
Exon48,736,41948,736,5571392
Exon48,734,16548,734,3531892
Exon48,733,28048,733,5042252
Exon48,731,96348,732,0711090
Exon48,730,01148,730,1221121
Exon48,719,69848,719,8871902
Exon48,715,86748,716,0411750
Exon48,713,35448,713,5471942
Exon48,711,77148,711,9511810
Exon48,710,79848,710,9581612
Exon48,706,85148,707,0622121
Exon48,701,71248,701,799882
Exon48,701,46748,701,6101442
Exon48,697,67448,697,8782050
Exon48,696,30348,696,370682
Exon48,694,93948,695,1592211
Exon48,691,56548,691,654901
Exon48,691,28948,691,360721
Exon48,691,02048,691,2212022
Exon48,690,24748,690,4351892
Exon48,689,40548,689,5441401
Exon48,686,73448,686,9382052
UTR
48,685,66948,686,733