VPS18 - VPS18, CORVET/HOPS core subunit

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

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Cross References
UniProt: Q9P253 HGNC Approved Gene Symbol: VPS18 
Ensembl ENSG00000104142 
Synonyms : KIAA1475, PEP3 Previous Names: "vacuolar protein sorting protein 18", "vacuolar protein sorting 18 homolog (S. cerevisiae)"
HgncId : HGNC:15972  Omim: 608551 
GenBank: AF308802 
 
Genomic coordinates: Cytogenetic location: 15q15.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

VPS18 Gene Structure

Chromosome: chr15
Genbank ID: NM_020857 Orientation: +
Length coding sequence : 2919 nucleotides.
Regionstartendregion lengthphase at end
UTR41,186,62741,186,966
Exon41,186,96741,187,057911
Exon41,188,13641,188,2771422
Exon41,191,10541,191,196921
Exon41,191,34241,193,21218710
Exon41,194,81441,195,5397260
UTR41,195,54041,196,173