6FYY

Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.02 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.

Llacer, J.L.Hussain, T.Saini, A.K.Nanda, J.D.Kaur, S.Gordiyenko, Y.Kumar, R.Hinnebusch, A.G.Lorsch, J.R.Ramakrishnan, V.

(2018) Elife 7: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S0
A
254Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS0
Find proteins for Q6CN12 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CN12
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S1
B
255Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS1
Find proteins for Q6CWD0 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CWD0
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
KLLA0F09812p
C
259Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CKL3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CKL3
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
KLLA0D08305p
D
237Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CRK7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CRK7
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S4
E
261Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CWJ2 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CWJ2
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetails
KLLA0D10659p
F
227Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CRA3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CRA3
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S6
G
236Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS6
Find proteins for Q6CM04 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to Gene View: RPS6
Go to UniProtKB:  Q6CM04
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S7
H
190Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CTD6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CTD6
Entity ID: 12
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S8
I
201Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CMG3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CMG3
Entity ID: 13
MoleculeChainsSequence LengthOrganismDetails
KLLA0E23673p
J
188Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CM18 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CM18
Entity ID: 14
MoleculeChainsSequence LengthOrganismDetails
KLLA0B08173p
K
106Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CVZ5 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CVZ5
Entity ID: 15
MoleculeChainsSequence LengthOrganismDetails
KLLA0A10483p
L
156Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CX80 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CX80
Entity ID: 16
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S12
M
134Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CLU4 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CLU4
Entity ID: 17
MoleculeChainsSequence LengthOrganismDetails
KLLA0F18040p
N
151Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CJK0 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CJK0
Entity ID: 18
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S14
O
137Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS14 (CRY1)
Find proteins for P27069 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to Gene View: RPS14
Go to UniProtKB:  P27069
Entity ID: 19
MoleculeChainsSequence LengthOrganismDetails
KLLA0F07843p
P
142Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CKV4 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CKV4
Entity ID: 20
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S16
Q
143Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS16
Find proteins for Q875N2 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to Gene View: RPS16
Go to UniProtKB:  Q875N2
Entity ID: 21
MoleculeChainsSequence LengthOrganismDetails
KLLA0B01474p
R
136Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CWU3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CWU3
Entity ID: 22
MoleculeChainsSequence LengthOrganismDetails
KLLA0B01562p
S
146Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CWT9 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CWT9
Entity ID: 23
MoleculeChainsSequence LengthOrganismDetails
KLLA0A07194p
T
144Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CXM0 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CXM0
Entity ID: 24
MoleculeChainsSequence LengthOrganismDetails
KLLA0F25542p
U
117Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CIM1 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CIM1
Entity ID: 25
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S21
V
87Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS21
Find proteins for Q6CXT6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to Gene View: RPS21
Go to UniProtKB:  Q6CXT6
Entity ID: 26
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S22
W
130Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS22
Find proteins for Q6CW21 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CW21
Entity ID: 27
MoleculeChainsSequence LengthOrganismDetails
KLLA0B11231p
X
145Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for F2Z602 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  F2Z602
Entity ID: 28
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S24
Y
135Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CU44 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CU44
Entity ID: 29
MoleculeChainsSequence LengthOrganismDetails
KLLA0B06182p
Z
108Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CW78 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CW78
Entity ID: 30
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S26
a
119Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CS01 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CS01
Entity ID: 31
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S27
b
82Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CNL2 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CNL2
Entity ID: 32
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S28
c
67Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS28
Find proteins for P33285 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to Gene View: RPS28
Go to UniProtKB:  P33285
Entity ID: 33
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S29
d
56Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: RPS29
Find proteins for Q6CPG3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to Gene View: RPS29
Go to UniProtKB:  Q6CPG3
Entity ID: 34
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S30
e
63Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CUH5 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CUH5
Entity ID: 35
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin-40S ribosomal protein S27a
f
150Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Gene Names: ubi3
Find proteins for P69061 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  P69061
Entity ID: 36
MoleculeChainsSequence LengthOrganismDetails
KLLA0E12277p
g
326Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Mutation(s): 0 
Find proteins for Q6CNI7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
Go to UniProtKB:  Q6CNI7
Entity ID: 37
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L41-A
h
25Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: RPL41A (RPL47A, YL41A)
Find proteins for P0CX86 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P0CX86
Entity ID: 38
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 1A
i
153Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: TIF11
Find proteins for P38912 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P38912
Entity ID: 39
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 2 subunit alpha
j
304Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: SUI2 (TIF211)
Find proteins for P20459 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P20459
Entity ID: 40
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 2 subunit gamma
k
527Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: GCD11 (TIF213)
Find proteins for P32481 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P32481
Entity ID: 41
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 2 subunit beta
l
285Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: SUI3 (TIF212)
Find proteins for P09064 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P09064
Entity ID: 42
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 5
m
405Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: TIF5
Find proteins for P38431 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P38431
Entity ID: 43
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 3 subunit A
o
964Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: RPG1 (TIF32)
Find proteins for P38249 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P38249
Entity ID: 44
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 3 subunit B
p
763Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: PRT1 (CDC63)
Find proteins for P06103 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P06103
Entity ID: 45
MoleculeChainsSequence LengthOrganismDetails
eIF3c,Eukaryotic translation initiation factor 3 subunit C
q
812Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: NIP1
Find proteins for P32497 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P32497
Entity ID: 46
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 3 subunit G
r
274Saccharomyces cerevisiae (strain YJM789)Mutation(s): 0 
Gene Names: TIF35
Find proteins for A6ZZ25 (Saccharomyces cerevisiae (strain YJM789))
Go to UniProtKB:  A6ZZ25
Entity ID: 47
MoleculeChainsSequence LengthOrganismDetails
Eukaryotic translation initiation factor 3 subunit I
s
347Saccharomyces cerevisiae (strain YJM789)Mutation(s): 0 
Gene Names: TIF34
Find proteins for A6ZMK5 (Saccharomyces cerevisiae (strain YJM789))
Go to UniProtKB:  A6ZMK5
Entity ID: 1
MoleculeChainsLengthOrganism
tRNAi176Saccharomyces cerevisiae
Entity ID: 2
MoleculeChainsLengthOrganism
18S ribosomal RNA21798Kluyveromyces lactis NRRL Y-1140
Entity ID: 3
MoleculeChainsLengthOrganism
mRNA (31-MER)349Saccharomyces cerevisiae
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
a, b, f, l, m
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
2, k
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
GCP
Query on GCP

Download SDF File 
Download CCD File 
k
PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
C11 H18 N5 O13 P3
PHBDHXOBFUBCJD-KQYNXXCUSA-N
 Ligand Interaction
MET
Query on MET

Download SDF File 
Download CCD File 
k
METHIONINE
C5 H11 N O2 S
FFEARJCKVFRZRR-BYPYZUCNSA-N
 Ligand Interaction
Modified Residues  14 Unique
IDChainsTypeFormula2D DiagramParent
PSU
Query on PSU
2
RNA LINKINGC9 H13 N2 O9 PU
5MC
Query on 5MC
1, 2
RNA LINKINGC10 H16 N3 O8 PC
RIA
Query on RIA
1
RNA LINKINGC15 H23 N5 O14 P2A
1MG
Query on 1MG
1
RNA LINKINGC11 H16 N5 O8 PG
M2G
Query on M2G
1
RNA LINKINGC12 H18 N5 O8 PG
1MA
Query on 1MA
1
RNA LINKINGC11 H16 N5 O7 PA
AYA
Query on AYA
B
L-PEPTIDE LINKINGC5 H9 N O3ALA
C4J
Query on C4J
2
RNA linkingC14 H22 N3 O11 P

--

MA6
Query on MA6
2
RNA LINKINGC12 H18 N5 O7 PA
UNK
Query on UNK
1, q
L-PEPTIDE LINKINGC4 H9 N O2

--

T6A
Query on T6A
1
RNA LINKINGC15 H21 N6 O11 PA
2MG
Query on 2MG
1, 2
RNA LINKINGC11 H16 N5 O8 PG
7MG
Query on 7MG
1, 2
RNA LINKINGC11 H18 N5 O8 PG
H2U
Query on H2U
1
RNA LINKINGC9 H15 N2 O9 PU
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.02 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (United Kingdom)United KingdomMC_U105184332
Wellcome TrustUnited KingdomWT096570
FEBSUnited Kingdom--

Revision History 

  • Version 1.0: 2018-12-05
    Type: Initial release