6IPC

Non-native human ferritin 8-mer


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.443 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Disulfide-mediated conversion of 8-mer bowl-like protein architecture into three different nanocages.

Zang, J.Chen, H.Zhang, X.Zhang, C.Guo, J.Du, M.Zhao, G.

(2019) Nat Commun 10: 778-778


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ferritin heavy chain
A, B, C, E, F, G, H, I, J, K, M, N, O, P
176Homo sapiensMutation(s): 3 
Gene Names: FTH1 (FTH, FTHL6)
EC: 1.16.3.1
Find proteins for P02794 (Homo sapiens)
Go to Gene View: FTH1
Go to UniProtKB:  P02794
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ferritin heavy chain
D, L
176Homo sapiensMutation(s): 2 
Gene Names: FTH1 (FTH, FTHL6)
EC: 1.16.3.1
Find proteins for P02794 (Homo sapiens)
Go to Gene View: FTH1
Go to UniProtKB:  P02794
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MPD
Query on MPD

Download SDF File 
Download CCD File 
A, K
(4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.443 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.207 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 52.304α = 90.10
b = 139.223β = 90.28
c = 139.114γ = 90.18
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChinaBX201700284

Revision History 

  • Version 1.0: 2019-03-13
    Type: Initial release