7JN4

Rubisco in the apo state

  • Classification: PLANT PROTEIN
  • Organism(s): Chlamydomonas reinhardtii
  • Mutation(s): No 

  • Deposited: 2020-08-03 Released: 2020-11-18 
  • Deposition Author(s): Matthies, D., Jonikas, M.C., He, S.
  • Funding Organization(s): National Science Foundation (NSF, United States), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Howard Hughes Medical Institute (HHMI), Ministry of Education (MoE, Singapore), Biotechnology and Biological Sciences Research Council (BBSRC), Leverhulme Trust

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.68 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report



Literature

The Structural Basis of Rubisco Phase Separation in the Pyrenoid

He, S.Chou, H.Matthies, D.Wunder, T.Meyer, M.T.Atkinson, N.Martinez-Sanchez, A.Jeffrey, P.D.Port, S.A.Patena, W.He, G.Chen, V.K.Hughson, F.M.McCormick, A.J.Mueller Cajar, O.Engel, B.D.Yu, Z.Jonikas, M.C.

(null) Nature Plants 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Ribulose bisphosphate carboxylase large chainACEGIKMO475Chlamydomonas reinhardtiiMutation(s): 0 
Gene Names: rbcL
EC: 4.1.1.39
Find proteins for A0A218N8A3 (Chlamydomonas reinhardtii)
Explore A0A218N8A3 
Go to UniProtKB:  A0A218N8A3
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Ribulose bisphosphate carboxylase small chain 2, chloroplasticBDFHJLNP185Chlamydomonas reinhardtiiMutation(s): 0 
Gene Names: RBCS-2
EC: 4.1.1.39
Find proteins for P08475 (Chlamydomonas reinhardtii)
Explore P08475 
Go to UniProtKB:  P08475
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
SMC
Query on SMC
A,C,E,G,I,K,M,OL-PEPTIDE LINKINGC4 H9 N O2 SCYS
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.68 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, United States)United StatesIOS-1359682
National Science Foundation (NSF, United States)United StatesMCB-1935444
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesDP2-GM-119137
Howard Hughes Medical Institute (HHMI)United States55108535
Ministry of Education (MoE, Singapore)SingaporeMOE2018-T2-2-059
Biotechnology and Biological Sciences Research Council (BBSRC)United KingdomBB/S015531/1
Leverhulme TrustUnited KingdomRPG-2017-402
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM071574
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesT32GM007276

Revision History 

  • Version 1.0: 2020-11-18
    Type: Initial release