Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins 8052738 3000135 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052736 3002138 SCOP2B (2022-06-29)
K [auth N]SCOP2B SuperfamilyHomeodomain-like 8052973 3000001 SCOP2B (2022-06-29)
K [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052974 3001284 SCOP2B (2022-06-29)
N [auth V]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053136 3000068 SCOP2B (2022-06-29)
O [auth W]SCOP2B SuperfamilyRibosomal protein S8 8096922 3000709 SCOP2B (2022-06-29)
S [auth d]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052569 3000068 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8061280 3001397 SCOP2B (2022-06-29)
T [auth e]SCOP2B SuperfamilyRibosomal protein S30e-like 8053451 3002190 SCOP2B (2022-06-29)
V [auth F]SCOP2B SuperfamilyRibosomal protein S7 8065993 3000799 SCOP2B (2022-06-29)
W [auth K]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055713 3000034 SCOP2B (2022-06-29)
X [auth M]SCOP2B SuperfamilyL30e-like 8096946 3001739 SCOP2B (2022-06-29)
Y [auth P]SCOP2B SuperfamilyRibosomal protein S19 8086076 3000686 SCOP2B (2022-06-29)
Z [auth Q]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8103366 3000100 SCOP2B (2022-06-29)
AA [auth S]SCOP2B SuperfamilyS13-like H2TH domain 8098450 3000053 SCOP2B (2022-06-29)
CA [auth U]SCOP2B SuperfamilyRibosomal protein S10 8098648 3001336 SCOP2B (2022-06-29)
DA [auth Z]SCOP2B SuperfamilyWinged helix DNA-binding domain 8059235 3000034 SCOP2B (2022-06-29)
EA [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins 8063430 3000135 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyAlpha-L RNA-binding motif 8052758 3001473 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyNucleic acid-binding proteins 8052759 3000135 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052760 3000334 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyGS N-terminal domain-like 8053173 3000408 SCOP2B (2022-06-29)
H [auth I]SCOP2B Superfamily50S Ribosomal protein L14-like 8053083 3000433 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth L]Ribosomal_S17_1e6rbeL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
K [auth N]Ribosomal_S13_Ne6rbeN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
K [auth N]Ribosomal_S15_2e6rbeN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
M [auth R]Ribosomal_S17ee6rbeR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
N [auth V]Ribosomal_S21ee6rbeV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
O [auth W]Ribosomal_S8_N_1e6rbeW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
O [auth W]Ribosomal_S8_C_1e6rbeW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
P [auth X]Ribosom_S12_S23e6rbeX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
Q [auth Y]Ribosomal_S24ee6rbeY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
R [auth b]Ribosomal_S27ee6rbeb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
S [auth d]Ribosomal_S14_2e6rbed1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
B [auth A]Ribosomal_S2_2e6rbeA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
T [auth e]Ribosomal_S30e6rbee1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
U [auth D]Ribosomal_S3_Ce6rbeD1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
U [auth D]KH_2_3e6rbeD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
V [auth F]Ribosomal_S7_1e6rbeF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
W [auth K]S10_plectine6rbeK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
X [auth M]Ribosomal_L7Aee6rbeM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
Y [auth P]Ribosomal_S19e6rbeP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
Z [auth Q]Ribosomal_S9e6rbeQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
AA [auth S]Ribosomal_S13e6rbeS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
BA [auth T]Ribosomal_S19ee6rbeT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
CA [auth U]Ribosomal_S10_1e6rbeU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
C [auth B]Ribosomal_S3Ae_Ce6rbeB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
DA [auth Z]Ribosomal_S25e6rbeZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
EA [auth c]Ribosomal_S28ee6rbec1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
FA [auth f]Ribosomal_S27e6rbef1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
GA [auth g]ANAPC4_WD40_2e6rbeg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
D [auth C]Ribosomal_S5_C_1e6rbeC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
D [auth C]Ribosomal_S5_3e6rbeC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
D [auth C]Ribosomal_S5_2e6rbeC2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
ERibosomal_S4ee6rbeE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
E40S_S4_Ce6rbeE2 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
ERS4NTe6rbeE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
F [auth G]Ribosomal_S6ee6rbeG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
G [auth H]Ribosomal_S7e_Ne6rbeH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
G [auth H]Ribosomal_S7e_C_2e6rbeH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
H [auth I]Ribosomal_S8ee6rbeI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
I [auth J]S4e6rbeJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
J [auth L]2.40.50.1000 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (utative)
K [auth N]1.10.287.10 Mainly Alpha Orthogonal Bundle Helix Hairpins S15/NS1, RNA-bindingCATH (utative)
N [auth V]3.30.1230.20 Alpha Beta 2-Layer Sandwich Hypothetical Cytosolic Protein Chain: ACATH (utative)
O [auth W]3.30.1370.30 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
O [auth W]3.30.1490.10 Alpha Beta 2-Layer Sandwich Dna Ligase domain 1CATH (utative)
Q [auth Y]3.30.70.3370 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (utative)
R [auth b]2.20.25.100 Mainly Beta Single Sheet N-terminal domain of TfIIb Ribosomal protein S27CATH (utative)
S [auth d]4.10.830.10 Few Secondary Structures Irregular 30s Ribosomal Protein S14 Chain NCATH (utative)
B [auth A]3.40.50.10490 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glucose-6-phosphate isomerase like proteinCATH (utative)
V [auth F]1.10.455.10 Mainly Alpha Orthogonal Bundle Ribosomal Protein S7 Ribosomal protein S7/S5CATH (utative)
W [auth K]1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (utative)
X [auth M]3.30.1330.30 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
Z [auth Q]3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (utative)
CA [auth U]3.30.70.600 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Ribosomal protein S10CATH (utative)
DA [auth Z]1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (utative)
EA [auth c]2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (utative)
GA [auth g]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)
D [auth C]3.30.160.20 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain CATH (utative)
D [auth C]3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (utative)
E3.10.290.10 Alpha Beta Roll Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region Chain ACATH (utative)
E2.40.50.740 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Ribosomal protein S4, central domainCATH (utative)
E2.30.30.30 Mainly Beta Roll SH3 type barrels. CATH (utative)
H [auth I]1.10.168.20 Mainly Alpha Orthogonal Bundle Phosducin domain 2CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth L]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
J [auth L]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
K [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
N [auth V]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
O [auth W]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
P [auth X]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
Q [auth Y]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
B [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
U [auth D]PF07650KH domain (KH_2)KH domain- Domain
U [auth D]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
U [auth D]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
V [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
V [auth F]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
W [auth K]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
X [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
Y [auth P]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
Z [auth Q]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
AA [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
BA [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
CA [auth U]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
C [auth B]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
D [auth C]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
D [auth C]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
D [auth C]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
PF00467KOW motif (KOW)KOW motif- Family
F [auth G]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
F [auth G]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
G [auth H]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
H [auth I]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
I [auth J]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
I [auth J]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]18S ribosomal RNA---
J [auth L]40S ribosomal protein S11-A
K [auth N]40S ribosomal protein S13
L [auth O]40S ribosomal protein S14-A
M [auth R]40S ribosomal protein S17-A
N [auth V]40S ribosomal protein S21-A
O [auth W]40S ribosomal protein S22-A
P [auth X]40S ribosomal protein S23-A
Q [auth Y]40S ribosomal protein S24-A
R [auth b]40S ribosomal protein S27-A
S [auth d]40S ribosomal protein S29-A
B [auth A]40S ribosomal protein S0-A
T [auth e]40S ribosomal protein S30-A
U [auth D]40S ribosomal protein S3
V [auth F]40S ribosomal protein S5
W [auth K]40S ribosomal protein S10-A
X [auth M]40S ribosomal protein S12
Y [auth P]40S ribosomal protein S15
Z [auth Q]40S ribosomal protein S16-A
AA [auth S]40S ribosomal protein S18-A
BA [auth T]40S ribosomal protein S19-A
CA [auth U]40S ribosomal protein S20
C [auth B]40S ribosomal protein S1-A
DA [auth Z]40S ribosomal protein S25-A
EA [auth c]40S ribosomal protein S28-A
FA [auth f]Ubiquitin-40S ribosomal protein S31
GA [auth g]Guanine nucleotide-binding protein subunit beta-like protein
D [auth C]40S ribosomal protein S2
40S ribosomal protein S4-A
F [auth G]40S ribosomal protein S6-A
G [auth H]40S ribosomal protein S7-A
H [auth I]40S ribosomal protein S8-A
I [auth J]40S ribosomal protein S9-A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth L]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
J [auth L]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
J [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth L]IPR000266Small ribosomal subunit protein uS17Family
J [auth L]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
K [auth N]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
K [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
K [auth N]IPR000589Small ribosomal subunit protein uS15Family
K [auth N]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
L [auth O]IPR001971Small ribosomal subunit protein uS11Family
L [auth O]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
L [auth O]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth R]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
M [auth R]IPR001210Small ribosomal subunit protein eS17Family
M [auth R]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
N [auth V]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
N [auth V]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
N [auth V]IPR001931Small ribosomal subunit protein eS21Family
O [auth W]IPR000630Small ribosomal subunit protein uS8Family
O [auth W]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
O [auth W]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
P [auth X]IPR006032Small ribosomal subunit protein uS12Family
P [auth X]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth X]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
Q [auth Y]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
Q [auth Y]IPR001976Small ribosomal subunit protein eS24Family
Q [auth Y]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth Y]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
R [auth b]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
R [auth b]IPR000592Small ribosomal subunit protein eS27Family
R [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
S [auth d]IPR001209Small ribosomal subunit protein uS14Family
S [auth d]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
S [auth d]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
S [auth d]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
B [auth A]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
B [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth A]IPR001865Small ribosomal subunit protein uS2Family
B [auth A]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
T [auth e]IPR006846Small ribosomal subunit protein eS30Family
U [auth D]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
U [auth D]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
U [auth D]IPR004044K Homology domain, type 2Domain
U [auth D]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
U [auth D]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
U [auth D]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
U [auth D]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
V [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
V [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
V [auth F]IPR000235Small ribosomal subunit protein uS7Family
V [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
V [auth F]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
W [auth K]IPR037447Small ribosomal subunit protein eS10Family
W [auth K]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
W [auth K]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
W [auth K]IPR005326Plectin/eS10, N-terminalDomain
X [auth M]IPR000530Small ribosomal subunit protein eS12Family
X [auth M]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
X [auth M]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
X [auth M]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
Y [auth P]IPR002222Small ribosomal subunit protein uS19Family
Y [auth P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
Y [auth P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
Y [auth P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
Z [auth Q]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
Z [auth Q]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
Z [auth Q]IPR000754Small ribosomal subunit protein uS9Family
Z [auth Q]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
AA [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
AA [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
AA [auth S]IPR001892Small ribosomal subunit protein uS13Family
AA [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
BA [auth T]IPR001266Small ribosomal subunit protein eS19Family
BA [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
BA [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
BA [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
CA [auth U]IPR001848Small ribosomal subunit protein uS10Family
CA [auth U]IPR027486Small ribosomal subunit protein uS10 domainDomain
CA [auth U]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
CA [auth U]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
CA [auth U]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
C [auth B]IPR001593Small ribosomal subunit protein eS1Family
C [auth B]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
C [auth B]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
DA [auth Z]IPR004977Small ribosomal subunit protein eS25Family
DA [auth Z]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
EA [auth c]IPR028626Ribosomal protein eS28 conserved siteConserved Site
EA [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EA [auth c]IPR000289Small ribosomal subunit protein eS28Family
FA [auth f]IPR019954Ubiquitin conserved siteConserved Site
FA [auth f]IPR000626Ubiquitin-like domainDomain
FA [auth f]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
FA [auth f]IPR002906Small ribosomal subunit protein eS31Domain
FA [auth f]IPR019956Ubiquitin domainDomain
FA [auth f]IPR050158Ubiquitin and ubiquitin-likeFamily
FA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
FA [auth f]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth g]IPR019775WD40 repeat, conserved siteConserved Site
GA [auth g]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
GA [auth g]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
GA [auth g]IPR045223Small ribosomal subunit protein RACK1-likeFamily
GA [auth g]IPR001680WD40 repeatRepeat
GA [auth g]IPR020472G-protein beta WD-40 repeatRepeat
D [auth C]IPR000851Small ribosomal subunit protein uS5Family
D [auth C]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
D [auth C]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth C]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth C]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth C]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth C]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
IPR002942RNA-binding S4 domainDomain
IPR013845Small ribosomal subunit protein eS4, central regionDomain
IPR000876Small ribosomal subunit protein eS4Family
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IPR005824KOWDomain
F [auth G]IPR014401Small ribosomal subunit protein eS6-likeFamily
F [auth G]IPR001377Small ribosomal subunit protein eS6Family
F [auth G]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
G [auth H]IPR000554Small ribosomal subunit protein eS7Family
G [auth H]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
H [auth I]IPR001047Small ribosomal subunit protein eS8Family
H [auth I]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
H [auth I]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
H [auth I]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
I [auth J]IPR002942RNA-binding S4 domainDomain
I [auth J]IPR022801Small ribosomal subunit protein uS4Family
I [auth J]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
I [auth J]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
I [auth J]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
I [auth J]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily