7LIX

CaRSP1 and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum

Present annotations:

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Product Annotation
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d7lixb_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Porphyridium purpureum ) [TaxId: 35688 ],	SCOPe (2.08)
C	d7lixc_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Porphyridium purpureum ) [TaxId: 35688 ],	SCOPe (2.08)
D	d7lixd_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Porphyridium purpureum ) [TaxId: 35688 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Globin-like	8064814	3000554	SCOP2B (2022-02-25)
C	SCOP2B Superfamily	Globin-like	8064814	3000554	SCOP2B (2022-02-25)
D	SCOP2B Superfamily	Globin-like	8064814	3000554	SCOP2B (2022-02-25)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Phycobilisome	e7lixB1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
C	Phycobilisome	e7lixC1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
D	Phycobilisome	e7lixD1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Identifier	Description	Comments	Source
B, C, D	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	DomainDomain

Gene Product Annotation Gene Product Annotation

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	CaRSP1	none	none	none
B, C, D	B-phycoerythrin beta chain		metabolic process cellular process photosynthesis cellular metabolic process	intracellular anatomical structure cytoplasm chloroplast plastid envelope chloroplast thylakoid chloroplast thylakoid membrane plastid thylakoid membrane outer membrane organelle membrane organelle envelope organelle outer membrane envelope plastid thylakoid photosynthetic membrane plastid membrane thylakoid membrane organelle membrane-bounded organelle non-membrane-bounded organelle intracellular organelle intracellular membrane-bounded organelle intracellular non-membrane-bounded organelle plastid thylakoid membrane bounding membrane of organelle cellular anatomical entity light-harvesting complex phycobilisome protein-containing complex membrane protein complex

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B, C, D	MEN	Parent Component: ASN RESID: AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.