7LIX

CaRSP1 and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum

Present annotations:

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Product Annotation
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d7lixb_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Porphyridium purpureum ) [TaxId: 35688 ],	SCOPe (2.08)
C	d7lixc_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Porphyridium purpureum ) [TaxId: 35688 ],	SCOPe (2.08)
D	d7lixd_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Porphyridium purpureum ) [TaxId: 35688 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Globin-like	8064814	3000554	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Globin-like	8064814	3000554	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Globin-like	8064814	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Phycobilisome	e7lixB1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
C	Phycobilisome	e7lixC1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
D	Phycobilisome	e7lixD1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, C, D	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain

Gene Product Annotation Gene Product Annotation

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	CaRSP1
B, C, D	B-phycoerythrin beta chain		photosynthesis cellular metabolic process metabolic process cellular process	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope bounding membrane of organelle envelope thylakoid plastid envelope chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope bounding membrane of organelle envelope thylakoid plastid envelope chloroplast non-membrane-bounded organelle membrane cellular anatomical entity intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid intracellular non-membrane-bounded organelle outer membrane cytoplasm photosynthetic membrane organelle membrane protein-containing complex membrane protein complex light-harvesting complex phycobilisome

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B, C, D	MEN	Parent Component: ASN RESID: AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.