EEM: [(3S)-3-amino-4-hydroxy-4-oxo-butyl]-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]-methyl-selanium
EEM is a Ligand Of Interest in 5APG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5APG_EEM_A_1185 | 97% | 6% | 0.068 | 0.983 | 3.51 | 1.65 | 8 | 4 | 0 | 0 | 100% | 0.9959 |
5APG_EEM_B_1185 | 97% | 6% | 0.068 | 0.983 | 3.84 | 1.4 | 9 | 3 | 0 | 0 | 100% | 0.9941 |
5APG_EEM_C_1185 | 97% | 7% | 0.066 | 0.979 | 3.69 | 1.29 | 8 | 1 | 0 | 0 | 100% | 0.9956 |
4FHD_EEM_A_402 | 84% | 30% | 0.111 | 0.973 | 1.21 | 1.58 | 3 | 4 | 2 | 0 | 100% | 1 |
4FHG_EEM_A_402 | 84% | 29% | 0.113 | 0.975 | 1.29 | 1.55 | 3 | 3 | 2 | 0 | 100% | 1 |
4FHF_EEM_A_402 | 81% | 27% | 0.113 | 0.964 | 1.29 | 1.62 | 3 | 4 | 1 | 0 | 100% | 1 |
4RH0_EEM_A_401 | 76% | 29% | 0.143 | 0.981 | 1.24 | 1.58 | 3 | 2 | 1 | 0 | 100% | 0.9993 |
4FHE_EEM_A_407 | 68% | 27% | 0.156 | 0.967 | 1.31 | 1.61 | 3 | 3 | 0 | 0 | 100% | 1 |